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Intron Name: Anas_platyrhynchos_platyrhynchos_10_20538439_20539413_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20538439 - 20539413

Intron Length:

975

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCAACT

5'SS Class:

major

3'SS Sequence:

CTTCTAATTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

CTTCTTCTAATT

Flanking Amino Acid:

LRLDSIVIQQGRLIDQQSNK

Intron Amino Acid Position:

615

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.51

1.2

70.8

39.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

79.6

0.67

0.9

70.5

38.9

Minor 5ss

47.7

-0.2

2.6

67.9

42.7

Minor BPS

54.7

0.23

1.7

73.15

38.4

Associated Gene:

Gene:

SMARCA1

Ensembl Gene ID:

ENSAPLG00000013149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024184

20526581 - 20555327

28747

ENSAPLT00000022075

20526581 - 20555327

28747

ENSAPLT00000013756

20526581 - 20555327

28747