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Intron Name: Anas_platyrhynchos_platyrhynchos_10_20539547_20540721_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20539547 - 20540721

Intron Length:

1175

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTATGTTTGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTGAT

U12 Branch Point Sequence:

TGCTGCTGAACA

Flanking Amino Acid:

WNPQVDLQAMDRAHRIGQKK

Intron Amino Acid Position:

571

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.8

78.1

26.4

Major BPS

76.2

0.65

39.8

Major PPT

72.8

0.51

73.7

41.5

Minor 5ss

34.2

-1.8

2.8

36.8

41.9

Minor BPS

0.22

1.9

69.02

43.1

Associated Gene:

Gene:

SMARCA1

Ensembl Gene ID:

ENSAPLG00000013149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024184

20526581 - 20555327

28747

ENSAPLT00000022075

20526581 - 20555327

28747

ENSAPLT00000013756

20526581 - 20555327

28747