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Intron Name: Anas_platyrhynchos_platyrhynchos_10_20545051_20546478_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20545051 - 20546478

Intron Length:

1428

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

TGCTCTGCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

ATGTTATTAATT

Flanking Amino Acid:

VCLIGDKDARAAFIRDVMMP

Intron Amino Acid Position:

248

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

35.3

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

71.2

0.48

0.9

65.7

Minor 5ss

39.9

-1.1

3.4

54.7

43.6

Minor BPS

65.6

0.57

1.5

79.01

37.3

Associated Gene:

Gene:

SMARCA1

Ensembl Gene ID:

ENSAPLG00000013149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024184

20526581 - 20555327

28747

ENSAPLT00000013756

20526581 - 20555327

28747