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Intron Name: Anas_platyrhynchos_platyrhynchos_10_20546659_20547546_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20546659 - 20547546

Intron Length:

888

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCCATGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAGAA

U12 Branch Point Sequence:

TGTTTTAGAAAG

Flanking Amino Acid:

GVNGILADEMGLGKTLQTIA

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

74.1

36.5

Major BPS

0.5

39.8

Major PPT

75.7

0.58

0.9

71.1

34.9

Minor 5ss

39.8

-1.1

2.9

48.9

41.6

Minor BPS

45.9

-0.4

1.8

55.04

39.7

Associated Gene:

Gene:

SMARCA1

Ensembl Gene ID:

ENSAPLG00000013149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024184

20526581 - 20555327

28747

ENSAPLT00000013756

20526581 - 20555327

28747