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Intron Name: Anas_platyrhynchos_platyrhynchos_10_20547873_20548815_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20547873 - 20548815

Intron Length:

943

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTATGTCTT

5'SS Class:

major

3'SS Sequence:

TTGTGTTCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

GTGCACACAATT

Flanking Amino Acid:

DEKQCLISAGDYRHRRTEQE

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.45

1.1

68.1

42.8

Major BPS

100

1.24

0.5

100

Major PPT

83.6

0.76

0.8

81.3

36.4

Minor 5ss

47.5

-0.2

2.8

63.9

41.5

Minor BPS

-0.3

1.9

61.04

42.1

Associated Gene:

Gene:

SMARCA1

Ensembl Gene ID:

ENSAPLG00000013149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022075

20526581 - 20555327

28747

ENSAPLT00000013756

20526581 - 20555327

28747

ENSAPLT00000024184

20526581 - 20555327

28747