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Intron Name: Anas_platyrhynchos_platyrhynchos_10_20548983_20552296_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20548983 - 20552296

Intron Length:

3314

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTGGAAACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATAT

Flanking Amino Acid:

EIDPEYEEKMKADRAKRFEF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.8

27.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

60.8

0.24

1.1

52.6

45.1

Minor 5ss

38.8

-1.3

3.4

43.6

Minor BPS

65.1

0.55

1.6

84.45

36.3

Associated Gene:

Gene:

SMARCA1

Ensembl Gene ID:

ENSAPLG00000013149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022075

20526581 - 20555327

28747

ENSAPLT00000013756

20526581 - 20555327

28747

ENSAPLT00000024184

20526581 - 20555327

28747