Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_20608048_20610525_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20608048 - 20610525

Intron Length:

2478

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTGTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ACATTTTTAATC

Flanking Amino Acid:

SSLDNVRNWKADMEGSSLRS

Intron Amino Acid Position:

356

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

72.2

39.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

88.1

0.86

0.8

84.7

30.1

Minor 5ss

34.5

-1.8

3.4

45.9

49.3

Minor BPS

65.2

0.46

1.2

64.51

35.6

Associated Gene:

Gene:

GAB3

Ensembl Gene ID:

ENSAPLG00000013810

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032780

20579015 - 20617314

38300

ENSAPLT00000014427

20600692 - 20616812

16121