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Intron Name: Anas_platyrhynchos_platyrhynchos_10_20642750_20642909_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20642750 - 20642909

Intron Length:

160

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGACAT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTAAA

U12 Branch Point Sequence:

TTCTTGGTAACC

Flanking Amino Acid:

VAVDFTKMKRGIDGVMRTMN

Intron Amino Acid Position:

151

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.6

40.1

Major BPS

62.9

0.32

1.2

65.3

38.6

Major PPT

80.1

0.68

0.8

73.7

31.3

Minor 5ss

33.2

-1.9

3.2

40.2

45.4

Minor BPS

-0.1

2.6

69.02

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014738

20633732 - 20659550

25819

ENSAPLT00000039358

20633732 - 20663886

30155

ENSAPLT00000036732

20633732 - 20659583

25852

ENSAPLT00000035610

20633732 - 20659510

25779

ENSAPLT00000024300

20634451 - 20659550

25100

ENSAPLT00000047123

20633732 - 20659583

25852