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Intron Name: Anas_platyrhynchos_platyrhynchos_10_20645021_20649409_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20645021 - 20649409

Intron Length:

4389

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

GCTCTAATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATGAA

U12 Branch Point Sequence:

AATGCTCTAATT

Flanking Amino Acid:

DQGDIPDLTQAPSSLLEALE

Intron Amino Acid Position:

270

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

1.2

81.5

32.7

Major BPS

75.5

0.63

40.9

Major PPT

70.7

0.47

0.9

67.1

38.1

Minor 5ss

31.7

-2.1

3.1

40.9

45.4

Minor BPS

54.9

0.23

1.7

72.03

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036732

20633732 - 20659583

25852

ENSAPLT00000035610

20633732 - 20659510

25779

ENSAPLT00000024300

20634451 - 20659550

25100

ENSAPLT00000047123

20633732 - 20659583

25852

ENSAPLT00000014738

20633732 - 20659550

25819

ENSAPLT00000039358

20633732 - 20663886

30155