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Intron Name: Anas_platyrhynchos_platyrhynchos_10_20650510_20652273_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20650510 - 20652273

Intron Length:

1764

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGTGT

5'SS Class:

major

3'SS Sequence:

CCTCATCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

TATACCTCATCT

Flanking Amino Acid:

EEQARLQALKEQRLREISVV

Intron Amino Acid Position:

340

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

63.4

43.3

Major BPS

70.8

0.52

70.6

31.6

Major PPT

80.1

0.68

0.8

76.5

31.8

Minor 5ss

37.5

-1.4

3.5

56.6

47.6

Minor BPS

58.3

0.34

1.9

78.83

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014048

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014738

20633732 - 20659550

25819

ENSAPLT00000039358

20633732 - 20663886

30155

ENSAPLT00000036732

20633732 - 20659583

25852

ENSAPLT00000035610

20633732 - 20659510

25779

ENSAPLT00000024300

20634451 - 20659550

25100

ENSAPLT00000047123

20633732 - 20659583

25852