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Intron Name: Anas_platyrhynchos_platyrhynchos_10_20665206_20665837_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20665206 - 20665837

Intron Length:

632

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGGCCG

5'SS Class:

major

3'SS Sequence:

TCTCCCCTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

CTCCCCTTAAAG

Flanking Amino Acid:

PLGIPEAVFVEDVDSFMKQP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

55.7

42.9

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

71.3

0.48

70.8

27.6

Minor 5ss

25.8

-2.8

27.8

37.2

Minor BPS

62.3

0.25

1.6

62.06

45.4

Associated Gene:

Gene:

VBP1

Ensembl Gene ID:

ENSAPLG00000014527

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015141

20665113 - 20670081

4969