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Intron Name: Anas_platyrhynchos_platyrhynchos_10_20667067_20667522_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20667067 - 20667522

Intron Length:

456

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACTAT

5'SS Class:

strong_major

3'SS Sequence:

CATTTGTCCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAA

U12 Branch Point Sequence:

GTAATTTTAAGT

Flanking Amino Acid:

EILKHMQKKKESTNPMETRF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

77.3

33.9

Major BPS

78.5

0.71

0.9

69.7

37.1

Major PPT

62.8

0.29

1.1

60.1

40.4

Minor 5ss

44.9

-0.6

64.1

47.4

Minor BPS

55.2

0.24

1.7

69.69

41.3

Associated Gene:

Gene:

VBP1

Ensembl Gene ID:

ENSAPLG00000014527

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015141

20665113 - 20670081

4969