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Intron Name: Anas_platyrhynchos_platyrhynchos_10_20679922_20680614_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20679922 - 20680614

Intron Length:

693

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ATG|GCAGACAGC

5'SS Class:

major

3'SS Sequence:

CGGCAGCATGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCAGCAT

U12 Branch Point Sequence:

GGGCGCTGAGGC

Flanking Amino Acid:

MAIWLYQFRLI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.4

0.29

1.2

59.3

41.9

Major BPS

43.3

-0.4

1.5

47.7

45.7

Major PPT

43.6

-0.3

1.7

39.1

Minor 5ss

27.5

-2.6

4.1

39.3

41.6

Minor BPS

35.9

-1

38.36

39.4

Associated Gene:

Gene:

RAB39B

Ensembl Gene ID:

ENSAPLG00000014543

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047149

20674358 - 20680617

6260