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Intron Name: Anas_platyrhynchos_platyrhynchos_10_20701316_20701935_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20701316 - 20701935

Intron Length:

620

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGTTT

5'SS Class:

strong_major

3'SS Sequence:

GTTGTTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTGAT

U12 Branch Point Sequence:

AGGTTGTGAGCC

Flanking Amino Acid:

TTGSLHLSRKGNGRSPLPAM

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.8

88.6

27.1

Major BPS

68.9

0.47

1.2

60.7

45.9

Major PPT

79.2

0.66

72.9

42.2

Minor 5ss

42.7

-0.8

3.4

64.1

47.4

Minor BPS

41.3

-0.6

2.2

49.96

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014564

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025270

20688858 - 20710875

22018

ENSAPLT00000047742

20688858 - 20710875

22018

ENSAPLT00000015198

20688858 - 20710875

22018

ENSAPLT00000046583

20688858 - 20723054

34197

ENSAPLT00000046289

20688075 - 20754675

66601

ENSAPLT00000027441

20688075 - 20710875

22801