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Intron Name: Anas_platyrhynchos_platyrhynchos_10_20703949_20708507_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20703949 - 20708507

Intron Length:

4559

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGCATG

5'SS Class:

strong_major

3'SS Sequence:

TGTTACATTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

AATTTTTCAATT

Flanking Amino Acid:

SIRRKKGKVENEVNEHIRRG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

75.5

40.6

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

77.6

0.62

0.9

70.1

39.9

Minor 5ss

44.7

-0.6

2.9

58.1

40.6

Minor BPS

61.9

0.45

1.4

75.25

35.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014564

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025270

20688858 - 20710875

22018

ENSAPLT00000047742

20688858 - 20710875

22018

ENSAPLT00000015198

20688858 - 20710875

22018

ENSAPLT00000046583

20688858 - 20723054

34197

ENSAPLT00000046289

20688075 - 20754675

66601

ENSAPLT00000027441

20688075 - 20710875

22801