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Intron Name: Anas_platyrhynchos_platyrhynchos_10_2231224_2231762_F

Intron Information:

Intron Rank:

137590

Intron Class:

major

Intron Phase:

Intron Coordinates:

2231224 - 2231762

Intron Length:

539

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

75.1

35.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

90.7

0.92

0.6

84.9

29.9

Minor 5ss

36.2

-1.6

2.9

44.9

36.9

Minor BPS

70.5

0.72

1.5

86.8

33.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024092

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025584

2231204 - 2234279

3076