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Intron Name: Anas_platyrhynchos_platyrhynchos_10_2265270_2265535_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
2265270 - 2265535

Intron Length:
266

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAA|GTAAAGTAA

5'SS Class:
major

3'SS Sequence:
TTTTAATTTTCAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TGAATTTTAATT

Flanking Amino Acid:
GIVYRDLKPENILLDEAGHI

Intron Amino Acid Position:
203

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.1
0.5
1
68
33

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
88.2
0.86
0.8
85.7
33.4

Minor 5ss
37.1
-1.5
3.4
45.9
44

Minor BPS
64.4
0.53
1.2
73.77
37.2

Associated Gene:

Gene:
RPS6KA6

Ensembl Gene ID:

Chromosome:
10

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2249652 - 2284932
35281

2249652 - 2289110
39459

2249652 - 2285655
36004