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Intron Name: Anas_platyrhynchos_platyrhynchos_10_2311100_2312121_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2311100 - 2312121

Intron Length:

1022

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTAAATTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TATTTCTTAAAT

Flanking Amino Acid:

IKSDDKEQQQALLSDLPPEL

Intron Amino Acid Position:

646

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.7

86.9

30.1

Major BPS

84.4

0.85

1.1

34.5

Major PPT

73.6

0.53

0.9

67.5

37.6

Minor 5ss

34.7

-1.7

3.1

49.5

46.7

Minor BPS

79.7

1.01

1.2

90.42

32.6

Associated Gene:

Gene:

HDX

Ensembl Gene ID:

ENSAPLG00000007946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008270

2310974 - 2345155

34182