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Intron Name: Anas_platyrhynchos_platyrhynchos_10_2542836_2543563_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2542836 - 2543563

Intron Length:

728

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGTTT

5'SS Class:

strong_major

3'SS Sequence:

GCTTTGTTAGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTGAA

U12 Branch Point Sequence:

CATGACTGAAAC

Flanking Amino Acid:

PDDKDIHPDEDYWSESDQDD

Intron Amino Acid Position:

208

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

81.4

Major BPS

56.6

0.16

1.2

49.3

Major PPT

74.3

0.55

69.7

40.3

Minor 5ss

42.7

-0.8

3.4

64.6

46.7

Minor BPS

46.3

-0.3

1.8

54.97

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007509

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026774

2432929 - 2550342

117414

ENSAPLT00000025923

2426002 - 2550464

124463

ENSAPLT00000022686

2462103 - 2550464

88362

ENSAPLT00000035689

2378475 - 2546424

167950