Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_2976904_2988074_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2976904 - 2988074

Intron Length:

11171

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGTC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGTTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

CTTGTCTTATTT

Flanking Amino Acid:

LSRAGASVIKERIQDSPSPA

Intron Amino Acid Position:

365

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.99

0.8

82.4

28.6

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

76.7

0.6

75.1

38.8

Minor 5ss

-1.7

3.5

49.9

46.6

Minor BPS

58.2

0.34

1.7

74.56

43.3

Associated Gene:

Gene:

DACH2

Ensembl Gene ID:

ENSAPLG00000006115

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031774

2751818 - 3038825

287008

ENSAPLT00000006350

2751818 - 3038825

287008