Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_331694_332758_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

331694 - 332758

Intron Length:

1065

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAGGAATC

5'SS Class:

major

3'SS Sequence:

GGTGTTTGTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTCAC

U12 Branch Point Sequence:

TGACACTCACTC

Flanking Amino Acid:

SEEEKHLGILGPVIKAEVGD

Intron Amino Acid Position:

473

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

1.1

70.2

40.5

Major BPS

64.9

0.37

29.8

Major PPT

67.1

0.39

61.8

44.4

Minor 5ss

37.1

-1.5

3.4

52.8

44.2

Minor BPS

43.1

-0.5

1.9

51.19

39.2

Associated Gene:

Gene:

HEPH

Ensembl Gene ID:

ENSAPLG00000005347

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045856

324698 - 345391

20694

ENSAPLT00000005585

323350 - 345391

22042