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Intron Name: Anas_platyrhynchos_platyrhynchos_10_332891_333574_F


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
332891 - 333574

Intron Length:
684

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTTTGTGGC

5'SS Class:
major

3'SS Sequence:
CTCTGTTTTAAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGAGAA

U12 Branch Point Sequence:
TCTGTTTTAAAG

Flanking Amino Acid:
KAWEGMRYHDGLSQHGISVA

Intron Amino Acid Position:
517

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
66
0.38
1.2
57.1
40.4

Major BPS
54.8
0.12
1.2
52.7
43.2

Major PPT
73.2
0.52
1
73.5
34.9

Minor 5ss
35.6
-1.6
3
41.4
39.5

Minor BPS
55.8
0.04
1.6
59.29
43.1

Associated Gene:

Gene:
HEPH

Ensembl Gene ID:

Chromosome:
10

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

324698 - 345391
20694

323350 - 345391
22042