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Intron Name: Anas_platyrhynchos_platyrhynchos_10_333787_335425_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

333787 - 335425

Intron Length:

1639

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAAGG

5'SS Class:

strong_major

3'SS Sequence:

GATTGTATCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TAAAAATTAACA

Flanking Amino Acid:

PGTLDDNNKQKGIDKEFYLL

Intron Amino Acid Position:

588

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

68.8

42.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

66.5

0.37

63.2

42.6

Minor 5ss

32.2

-2

40.4

45.3

Minor BPS

52.6

0.08

1.8

65.38

39.6

Associated Gene:

Gene:

HEPH

Ensembl Gene ID:

ENSAPLG00000005347

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045856

324698 - 345391

20694

ENSAPLT00000005585

323350 - 345391

22042