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Intron Name: Anas_platyrhynchos_platyrhynchos_10_3370836_3390403_R

Intron Information:

Intron Rank:

130854

Intron Class:

major

Intron Phase:

Intron Coordinates:

3370836 - 3390403

Intron Length:

19568

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TGTATTTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAC

U12 Branch Point Sequence:

TGTATTTTCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

80.5

27.7

Major BPS

72.8

0.57

30.3

Major PPT

81.3

0.7

0.9

75.9

37.9

Minor 5ss

42.9

-0.8

2.8

57.1

40.8

Minor BPS

54.5

0.14

1.8

68.05

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017640

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041916

3370376 - 3390419

20044