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Intron Name: Anas_platyrhynchos_platyrhynchos_10_337140_337387_F


Intron Information:

Intron Rank:
13

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
337140 - 337387

Intron Length:
248

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTACATCTC

5'SS Class:
major

3'SS Sequence:
CTGCATTTCTCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATTTGAG

U12 Branch Point Sequence:
ATTTGAGTAACA

Flanking Amino Acid:
ERERHSHSTESYADIFLSNE

Intron Amino Acid Position:
779

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.6
0.63
1
69.7
41.2

Major BPS
63.6
0.34
1.5
63.1
44.4

Major PPT
75.1
0.56
0.9
72.4
37.4

Minor 5ss
37.1
-1.5
3.3
52.9
44.2

Minor BPS
47.5
-0.1
2.5
70.86
41.2

Associated Gene:

Gene:
HEPH

Ensembl Gene ID:

Chromosome:
10

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

324698 - 345391
20694

323350 - 345391
22042