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Intron Name: Anas_platyrhynchos_platyrhynchos_10_3445383_3446525_R

Intron Information:

Intron Rank:

131610

Intron Class:

major_hybrid

Intron Phase:

Intron Coordinates:

3445383 - 3446525

Intron Length:

1143

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTTGGA

5'SS Class:

major

3'SS Sequence:

GACTCATGAAAAG|A

3'SS Class:

major_hybrid

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TTTTTTTTGACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

1.1

65.4

40.7

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

48.2

-0.1

1.2

45.5

39.4

Minor 5ss

31.1

-2.2

3.3

41.5

44.9

Minor BPS

1.09

0.9

94.3

25.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021736

3442920 - 3595912

152993