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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_4253531_4254244_R

Intron Information:

Intron Rank:
150457
Intron Class:
major
Intron Phase:
Intron Coordinates:
4253531 - 4254244
Intron Length:
714

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CCT|GTGAGTGTT
5'SS Class:
major
3'SS Sequence:
ACTGTATTTGCAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
AATACAA
U12 Branch Point Sequence:
GTTTTCTGTACT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
72.9
0.54
1.1
74.7
35.4
Major BPS
57
0.17
0.9
65
30.8
Major PPT
77
0.61
0.9
69.9
39.9
Minor 5ss
36.1
-1.6
3.5
59
45.5
Minor BPS
61.1
0.43
1.8
81.47
39.6

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000028442
Chromosome:
10

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000022048
4252050 - 4254359
2310