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Intron Name: Anas_platyrhynchos_platyrhynchos_10_4362057_4362169_F

Intron Information:

Intron Rank:

127983

Intron Class:

major

Intron Phase:

Intron Coordinates:

4362057 - 4362169

Intron Length:

113

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCATA

5'SS Class:

strong_major

3'SS Sequence:

GTGCCCCTTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGGCAT

U12 Branch Point Sequence:

TGTGTGTTGAGC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.8

83.2

30.8

Major BPS

52.1

0.05

1.5

63.4

44.3

Major PPT

69.2

0.43

0.9

62.4

34.6

Minor 5ss

37.5

-1.4

48.1

47.6

Minor BPS

43.7

-0.5

2.3

57.24

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018960

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047304

4361319 - 4384543

23225