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Intron Name: Anas_platyrhynchos_platyrhynchos_10_4391239_4391385_F

Intron Information:

Intron Rank:

127982

Intron Class:

major

Intron Phase:

Intron Coordinates:

4391239 - 4391385

Intron Length:

147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTCTGTATG

5'SS Class:

major

3'SS Sequence:

TGCCTATTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCAAAT

U12 Branch Point Sequence:

ACTTGCCTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

1.3

74.4

41.9

Major BPS

64.7

0.37

1.1

69.5

34.1

Major PPT

0.58

0.8

73.6

35.9

Minor 5ss

40.8

-1

2.6

51.1

45.4

Minor BPS

45.6

-0.2

2.2

66.6

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018960

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041285

4361319 - 4392189

30871