Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_443450_443596_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

443450 - 443596

Intron Length:

147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGGAGC

5'SS Class:

major

3'SS Sequence:

CTGCGCCTCCGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GGCTGAG

U12 Branch Point Sequence:

GGCTGAGGCACT

Flanking Amino Acid:

AVSPASKGQLMQHKWPHAPV

Intron Amino Acid Position:

434

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

65.6

Major BPS

43.9

-0.3

1.6

36.8

44.4

Major PPT

48.2

-0.1

1.7

49.9

39.3

Minor 5ss

27.3

-2.6

30.8

36.9

Minor BPS

30.9

-1.4

2.5

47.22

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006375

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006608

441661 - 452404

10744