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Intron Name: Anas_platyrhynchos_platyrhynchos_10_4438454_4446928_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

4438454 - 4446928

Intron Length:

8475

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGTGGAG

5'SS Class:

major

3'SS Sequence:

TTCCTTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TAATTTTTAAAA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.3

0.43

1.1

56.8

42.4

Major BPS

90.4

0.7

90.2

19.3

Major PPT

90.5

0.91

0.6

83.8

31.2

Minor 5ss

27.2

-2.6

3.6

36.9

47.7

Minor BPS

0.5

1.3

70.35

35.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006804

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037486

4437615 - 4756371

318757