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Intron Name: Anas_platyrhynchos_platyrhynchos_10_4447513_4466861_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4447513 - 4466861

Intron Length:

19349

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTTTC

5'SS Class:

strong_major

3'SS Sequence:

ATTTACTTGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTTTTTAAAA

Flanking Amino Acid:

NGIQHYELLKPKTAPKRTFG

Intron Amino Acid Position:

181

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

78.3

32.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

74.2

0.55

70.1

40.4

Minor 5ss

37.9

-1.4

3.2

51.5

45.7

Minor BPS

72.4

0.7

1.2

78.49

31.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006804

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030087

4396147 - 4880928

484782

ENSAPLT00000037486

4437615 - 4756371

318757

ENSAPLT00000026621

4446973 - 4709391

262419

ENSAPLT00000036140

4446973 - 4704389

257417

ENSAPLT00000022435

4396147 - 4875786

479640

ENSAPLT00000032312

4396147 - 4623782

227636

ENSAPLT00000007054

4446973 - 4629342

182370

ENSAPLT00000031319

4396147 - 4818515

422369

ENSAPLT00000038283

4396147 - 4753066

356920