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Intron Name: Anas_platyrhynchos_platyrhynchos_10_5540807_5541872_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5540807 - 5541872

Intron Length:

1066

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

CTCCCTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TAAGAAATAATT

Flanking Amino Acid:

LRVSLTSNPVSWVNNFGHEG

Intron Amino Acid Position:

189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.1

1.02

0.7

86.6

22.3

Major BPS

71.2

0.53

70.3

31.9

Major PPT

83.6

0.76

0.7

75.7

32.8

Minor 5ss

30.6

-2.2

2.6

35.8

41.1

Minor BPS

43.6

-0.4

61.64

41.6

Associated Gene:

Gene:

DIAPH2

Ensembl Gene ID:

ENSAPLG00000003882

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046828

5511287 - 5601134

89848

ENSAPLT00000034199

5511287 - 5601134

89848

ENSAPLT00000004091

5511287 - 5601134

89848