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Intron Name: Anas_platyrhynchos_platyrhynchos_10_5542103_5542776_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5542103 - 5542776

Intron Length:

674

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTTGTTAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TTTATTTTCACT

Flanking Amino Acid:

QCLKAFMNNKYGLQRILGDE

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

83.5

27.6

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

69.6

0.44

1.1

74.9

Minor 5ss

36.9

-1.5

3.1

49.9

40.5

Minor BPS

63.2

0.5

1.8

83.78

37.4

Associated Gene:

Gene:

DIAPH2

Ensembl Gene ID:

ENSAPLG00000003882

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046828

5511287 - 5601134

89848

ENSAPLT00000034199

5511287 - 5601134

89848

ENSAPLT00000004091

5511287 - 5601134

89848