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Intron Name: Anas_platyrhynchos_platyrhynchos_10_5546240_5547544_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5546240 - 5547544

Intron Length:

1305

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTACGTAGT

5'SS Class:

major

3'SS Sequence:

GTCTTAAAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

ACTGTCTTAAAA

Flanking Amino Acid:

LRCGLKKILPALKDKENEEL

Intron Amino Acid Position:

357

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.3

0.39

1.2

66.2

44.9

Major BPS

73.8

0.59

0.9

26.8

Major PPT

61.7

0.26

1.1

56.4

41.7

Minor 5ss

39.3

-1.2

3.1

60.6

43.9

Minor BPS

60.9

0.34

1.5

66.25

40.3

Associated Gene:

Gene:

DIAPH2

Ensembl Gene ID:

ENSAPLG00000003882

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034199

5511287 - 5601134

89848

ENSAPLT00000004091

5511287 - 5601134

89848

ENSAPLT00000046828

5511287 - 5601134

89848