Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_5547664_5548047_F

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

5547664 - 5548047

Intron Length:

384

Sequence Information:

Terminal Dinucleotides:

AT-AC

5'SS Sequence:

GGA|ATATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

ACAATGTTTGCAC|T

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTTCCTTAACA

Flanking Amino Acid:

HRLNDIRAEMDDMNEVFHLL

Intron Amino Acid Position:

396

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

30.9

-1.1

3.3

44.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

39.9

-0.5

3.2

Minor 5ss

96.3

1.54

0.8

89.8

28.6

Minor BPS

92.9

1.34

0.7

94.2

22.5

Associated Gene:

Gene:

DIAPH2

Ensembl Gene ID:

ENSAPLG00000003882

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004091

5511287 - 5601134

89848

ENSAPLT00000046828

5511287 - 5601134

89848

ENSAPLT00000034199

5511287 - 5601134

89848