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Intron Name: Anas_platyrhynchos_platyrhynchos_10_5550716_5552315_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5550716 - 5552315

Intron Length:

1600

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

ATGATTGTTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

ACTTTTATGATT

Flanking Amino Acid:

EKKAAEFSRKFDEEFTARQE

Intron Amino Acid Position:

497

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

78.2

36.3

Major BPS

84.6

0.86

41.2

Major PPT

72.5

0.51

65.1

Minor 5ss

38.6

-1.3

52.1

38.3

Minor BPS

51.4

0.13

1.5

68.85

36.6

Associated Gene:

Gene:

DIAPH2

Ensembl Gene ID:

ENSAPLG00000003882

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046828

5511287 - 5601134

89848

ENSAPLT00000034199

5511287 - 5601134

89848

ENSAPLT00000004091

5511287 - 5601134

89848