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Intron Name: Anas_platyrhynchos_platyrhynchos_10_5552421_5554787_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5552421 - 5554787

Intron Length:

2367

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTAAATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

GCTCTTTTAAAT

Flanking Amino Acid:

ETEIKQLRTQAPVQTSQQRE

Intron Amino Acid Position:

532

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

78.8

29.6

Major BPS

90.4

0.7

90.2

19.3

Major PPT

82.5

0.73

0.9

79.2

Minor 5ss

32.9

-2

2.9

40.3

45.4

Minor BPS

59.8

0.39

1.4

70.85

Associated Gene:

Gene:

DIAPH2

Ensembl Gene ID:

ENSAPLG00000003882

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034199

5511287 - 5601134

89848

ENSAPLT00000004091

5511287 - 5601134

89848

ENSAPLT00000046828

5511287 - 5601134

89848