Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_5594857_5600811_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5594857 - 5600811

Intron Length:

5955

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAAG

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTTTCTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTTTACTTATTG

Flanking Amino Acid:

ELQHVESASKVSAQTLKSNL

Intron Amino Acid Position:

975

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.9

77.9

38.6

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

83.6

0.76

0.6

83.8

24.3

Minor 5ss

38.7

-1.3

2.8

47.8

47.9

Minor BPS

62.7

0.26

1.8

72.33

40.7

Associated Gene:

Gene:

DIAPH2

Ensembl Gene ID:

ENSAPLG00000003882

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046828

5511287 - 5601134

89848

ENSAPLT00000034199

5511287 - 5601134

89848

ENSAPLT00000004091

5511287 - 5601134

89848