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Intron Name: Anas_platyrhynchos_platyrhynchos_10_5822177_5824351_F

Intron Information:

Intron Rank:

125770

Intron Class:

major

Intron Phase:

Intron Coordinates:

5822177 - 5824351

Intron Length:

2175

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGCAAT

5'SS Class:

major

3'SS Sequence:

ATTTCTTGACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TATTTCTTGACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

0.9

75.8

35.2

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

68.5

0.42

63.6

42.2

Minor 5ss

35.7

-1.6

45.4

43.9

Minor BPS

82.6

1.11

91.78

30.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017740

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023631

5810057 - 5824517

14461