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Intron Name: Anas_platyrhynchos_platyrhynchos_10_584890_585926_F


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
584890 - 585926

Intron Length:
1037

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCT|GTAAGAGAC

5'SS Class:
major

3'SS Sequence:
GTTTCTTTCCTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTTAA

U12 Branch Point Sequence:
TTTTGCTTAACA

Flanking Amino Acid:
LTKVLDSVHPIAKDLHQFTF

Intron Amino Acid Position:
335

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.7
0.46
1.1
62.8
35.9

Major BPS
67.1
0.42
1.1
57.7
41.3

Major PPT
79.9
0.67
0.8
73.3
37.1

Minor 5ss
33.6
-1.9
3.5
51.6
45.1

Minor BPS
81.5
0.99
1.6
91.36
30.2

Associated Gene:

Gene:
AR

Ensembl Gene ID:

Chromosome:
10

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

555916 - 586082
30167