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Intron Name: Anas_platyrhynchos_platyrhynchos_10_6016385_6111779_F

Intron Information:

Intron Rank:

141296

Intron Class:

major

Intron Phase:

Intron Coordinates:

6016385 - 6111779

Intron Length:

95395

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTATGTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGTTTTTTATGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

75.1

35.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

80.3

0.68

0.9

74.4

40.4

Minor 5ss

29.8

-2.3

3.3

37.5

47.2

Minor BPS

55.3

0.25

1.9

75.62

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026077

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028031

6015750 - 6112267

96518