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Intron Name: Anas_platyrhynchos_platyrhynchos_10_622042_623489_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

622042 - 623489

Intron Length:

1448

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTCCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCCTCTAAACT

Flanking Amino Acid:

PMDQKPGAKQSTLDLTLKSC

Intron Amino Acid Position:

458

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

0.9

71.2

34.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

86.4

0.82

0.6

Minor 5ss

28.3

-2.5

3.1

31.3

36.6

Minor BPS

64.5

0.53

1.7

80.65

41.4

Associated Gene:

Gene:

OPHN1

Ensembl Gene ID:

ENSAPLG00000006763

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007059

606686 - 656685

50000