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Intron Name: Anas_platyrhynchos_platyrhynchos_10_6230856_6234733_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6230856 - 6234733

Intron Length:

3878

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGGC

5'SS Class:

strong_major

3'SS Sequence:

TTACCCAACCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAC

U12 Branch Point Sequence:

TTTTACCCAACC

Flanking Amino Acid:

TVEPAAGSPKELRLPWERSP

Intron Amino Acid Position:

998

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

66.6

39.6

Major BPS

74.2

0.6

39.4

Major PPT

60.3

0.23

0.9

52.4

36.7

Minor 5ss

31.2

-2.1

3.3

41.1

45.6

Minor BPS

55.8

0.16

2.1

77.16

38.3

Associated Gene:

Gene:

PCDH19

Ensembl Gene ID:

ENSAPLG00000003793

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003885

6230468 - 6287037

56570