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Intron Name: Anas_platyrhynchos_platyrhynchos_10_6258499_6261715_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6258499 - 6261715

Intron Length:

3217

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTAGG

5'SS Class:

strong_major

3'SS Sequence:

TCTCCCCCAGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAC

U12 Branch Point Sequence:

TCTCCCCCAGCA

Flanking Amino Acid:

YVNSRAHLIKSSTFKDLEGN

Intron Amino Acid Position:

843

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.87

0.9

74.4

41.9

Major BPS

0.28

1.1

63.1

35.8

Major PPT

71.9

0.49

0.8

27.8

Minor 5ss

41.2

-1

2.5

51.1

45.4

Minor BPS

-0.3

2.1

62.3

43.4

Associated Gene:

Gene:

PCDH19

Ensembl Gene ID:

ENSAPLG00000003793

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003885

6230468 - 6287037

56570