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Intron Name: Anas_platyrhynchos_platyrhynchos_10_6281478_6284528_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6281478 - 6284528

Intron Length:

3051

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGAAC

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTCCCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAG

U12 Branch Point Sequence:

ATGCTCTCAGCT

Flanking Amino Acid:

DNKEIRTYNCRIAEYSYGHQ

Intron Amino Acid Position:

714

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

75.4

34.2

Major BPS

58.6

0.22

1.5

38.9

Major PPT

75.3

0.57

0.8

73.8

31.3

Minor 5ss

31.9

-2.1

3.2

42.1

Minor BPS

49.1

0.01

1.8

68.02

42.6

Associated Gene:

Gene:

PCDH19

Ensembl Gene ID:

ENSAPLG00000003793

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003885

6230468 - 6287037

56570