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Intron Name: Anas_platyrhynchos_platyrhynchos_10_6295946_6296055_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6295946 - 6296055

Intron Length:

110

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCACG

5'SS Class:

strong_major

3'SS Sequence:

CTGCTGGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATCAA

U12 Branch Point Sequence:

TGATCAAGAAAC

Flanking Amino Acid:

VKDSADGVIKRVMLRGPEPG

Intron Amino Acid Position:

200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.4

40.3

Major BPS

63.9

0.34

1.2

40.9

Major PPT

68.5

0.42

61.2

40.1

Minor 5ss

34.3

-1.8

2.8

40.4

45.5

Minor BPS

44.1

-0.4

57.51

39.6

Associated Gene:

Gene:

SRPX2

Ensembl Gene ID:

ENSAPLG00000008584

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008924

6294730 - 6297229

2500