Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_6298747_6298950_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6298747 - 6298950

Intron Length:

204

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGGAGC

5'SS Class:

major

3'SS Sequence:

TCCTTTTTCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATAAC

U12 Branch Point Sequence:

CTGTCTATAACC

Flanking Amino Acid:

LGGVRLGVGNGMSKGQAVDW

Intron Amino Acid Position:

903

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

65.6

Major BPS

65.6

0.39

1.1

67.7

34.6

Major PPT

74.3

0.55

74.1

34.4

Minor 5ss

27.3

-2.6

30.8

36.9

Minor BPS

0.39

1.7

70.81

40.9

Associated Gene:

Gene:

SYTL4

Ensembl Gene ID:

ENSAPLG00000007671

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028882

6298604 - 6308041

9438

ENSAPLT00000008022

6298604 - 6308041

9438