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Intron Name: Anas_platyrhynchos_platyrhynchos_10_6299766_6300254_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6299766 - 6300254

Intron Length:

489

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTGT

U12 Branch Point Sequence:

TTTTTTTTGTTT

Flanking Amino Acid:

KHPVAGTGRKGKTGEGGELQ

Intron Amino Acid Position:

800

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

74.9

35.3

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

91.6

0.94

0.7

84.6

Minor 5ss

29.4

-2.4

3.1

33.3

41.7

Minor BPS

46.8

-0.1

3.4

81.5

34.7

Associated Gene:

Gene:

SYTL4

Ensembl Gene ID:

ENSAPLG00000007671

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028882

6298604 - 6308041

9438

ENSAPLT00000008022

6298604 - 6308041

9438