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Intron Name: Anas_platyrhynchos_platyrhynchos_10_6304544_6305061_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
6304544 - 6305061

Intron Length:
518

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGC|GTGAGTACC

5'SS Class:
major

3'SS Sequence:
CTCTGCCCTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCCTCAT

U12 Branch Point Sequence:
CGGCCCCTCATT

Flanking Amino Acid:
SWRCKVCTKEAELKKTTGDW

Intron Amino Acid Position:
368

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
65.9
0.38
1.3
65.8
40.2

Major BPS
70
0.5
1.1
71.2
35.2

Major PPT
76.4
0.6
0.8
69.4
31.3

Minor 5ss
32.5
-2
2.6
33.8
33.9

Minor BPS
44.6
-0.3
2
58.61
44.6

Associated Gene:

Gene:
SYTL4

Ensembl Gene ID:

Chromosome:
10

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

6298604 - 6308041
9438

6298604 - 6308041
9438